Document Type
Article
Publication Date
7-21-2020
Keywords
JGM
JAX Source
Viruses 2020 Jul 21; 12(7):783
Volume
12
Issue
7
First Page
775
Last Page
775
ISSN
1999-4915
PMID
32708087
DOI
https://doi.org/10.3390/v12070783
Grant
GM133600
Abstract
Insertions of endogenous retroviruses cause a significant fraction of mutations in inbred mice but not all strains are equally susceptible. Notably, most new Intracisternal A particle (IAP) ERV mutagenic insertions have occurred in C3H mice. We show here that strain-specific insertional polymorphic IAPs accumulate faster in C3H/HeJ mice, relative to other sequenced strains, and that IAP transcript levels are higher in C3H/HeJ embryonic stem (ES) cells compared to other ES cells. To investigate the mechanism for high IAP activity in C3H mice, we identified 61 IAP copies in C3H/HeJ ES cells enriched with H3K4me3 (a mark of active promoters) and, among those tested, all are unmethylated in C3H/HeJ ES cells. Notably, 13 of the 61 are specific to C3H/HeJ and are members of the non-autonomous 1Δ1 IAP subfamily that is responsible for nearly all new insertions in C3H. One copy is full length with intact open reading frames and hence potentially capable of providing proteins in
Recommended Citation
Rebollo R,
Galvão-Ferrarini M,
Gagnier L,
Zhang Y,
Ferraj A,
Beck C,
Lorincz M,
Mager D.
Inter-Strain Epigenomic Profiling Reveals a Candidate IAP Master Copy in C3H Mice. Viruses 2020 Jul 21; 12(7):783
Comments
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