Identifying susceptibility genes for essential hypertension by transcriptome-wide association study.
Document Type
Article
Publication Date
12-1-2022
Publication Title
Biochem Biophys Rep
Keywords
JMG
JAX Source
Biochem Biophys Rep. 2022;32:101387
Volume
32
First Page
101387
ISSN
2405-5808
PMID
36438602
DOI
https://doi.org/10.1016/j.bbrep.2022.101387
Grant
This study was supported by Natural Science Basic Research Plan in Shaanxi Province of China (No.2022JM-440); National Natural Science Foundation of China (No. 31371298; 81301151); Xi’an Science and Technology Planning Project (No.21YXYJ0039)
Abstract
Hypertension is a leading risk factor of cardiovascular disease and mortality in the population worldwide. Recently, hundreds of genomic loci were reported for hypertension by GWAS, however, the most SNPs are located in intergenic regions of genome, where a functional cause is difficult to determine. In the current study, a TWAS of hypertension was conducted using 452,264 individuals including 84,640 patients. KEGG and GO enrichment analyses were performed for the hypertension-related genes identified via TWAS. PPI network analysis based on the STRING database was also performed to detect TWAS-identified genes in hypertension. We have identified 18,420 genes from the GWAS summary data, and of those 1010 non-overlapping genes expression were significantly associated with hypertension after FDR correction (PFDR <0.05) in four tissues (left heart ventricle, aorta, whole blood, and peripheral blood). The KEGG and GO terms were mostly related to autoimmune mechanisms, and the autoimmune-related pathways have also been enriched using GO analysis for PPI genes. We further performed Mendelian randomization analysis, and the results supported a significant association between autoimmunity and hypertension. Moreover, 15 novel hypertension-susceptible genes were identified in all tissues, and five of the genes (RBM6, HLA-DRB5, UHRF1BP1, LYZ, and TMEM116) were associated with autoimmune system, which provide further evidence supporting an autoimmune mechanism in hypertension. In summary, our study supports that an autoimmune mechanism plays an important role in the development of hypertension, and these findings will provide new biological insights that will assist in deciphering the molecular etiology of hypertension.
Recommended Citation
Huang L,
Zhang Q,
Valenzuela R,
Xu J,
Yan F,
Ma J.
Identifying susceptibility genes for essential hypertension by transcriptome-wide association study. Biochem Biophys Rep. 2022;32:101387
Comments
This is an open access article under the CC BY-NC-ND license (http://creativecommons.org/licenses/by- nc-nd/4.0/).