Students participate in an ongoing research program with the support of an experienced scientific mentor. They develop an independent project, implement their plan, analyze the data, and report the results. At the end of the summer, they present their findings to researchers, other students, and parents.
Submissions from 2017
Assessing Alzheimer's disease phenotypes in a type 2 diabetic mouse model., Bansri Patel
Identifying genetic variation with diet and sex-dependent effects in diversity outbred mice., Douglas Perkins
Modeling the differentiation of induced pluripotent stem cells using single cell RNA sequencing data, Tossapol Pholcharee
Spermatogonial stem cell self-renewal in the mouse, Danielle Smith
Chracterization of the effect of the Mnm(c) modifying allele on a new, CRISPR-based mouse model of SMARD1, Alex Thele
Submissions from 2016
Comparative genomics to determine the genotype responsible for a bacillus subtilis mutant phenotype., Amber Acquaye
Analysis of autoreactive type one diabetes contributory CD8 T-cell frequencies in Nfkbid deficient NOD mice., Jennifer Allocco
Determination of the mutation responsible for tachycardia in ENU mutant strain HLB468., Emma Anderson
The effects of high-fat diets with varied carbohydrate content on the development of diabetes in obese mouse models., Emma Anderson
Determining the genetic framework of hereditary deafness using bioinformatics., Alina K. Andrews
Communicating science at The Jackson Laboratory, Tamsyn Brann
Application of the metabolic inhibitor 2-Deoxy-D-Glucose to treat autoimmune disease in mice., Rachel Burke
From function to dysfunction: gene ontology and cancer., Yoojin Cha
Gene mapping of glaucoma related phenotypes in a forward genetics ENU screen., Sherley Collado-Justiniano
What can the genomics of normal development tell us about disease?, Raphael B. Espinoza
Examining expression of Scgb1c1 in developing and adult murine hearts., Adam Fasman
Tracking spontaneous hair cell regeneration in wildtype mice., Michaela Flonard
Testing the paradigm: cancer gene sets and the hallmarks of cancer., Jesus Roberto Franco
Shedding light on microbial dark matter: reference-based species identification in microbiomes., Nicole Gay
Functional interrogation of human T cell co-stimulatory molecules., Jordana Graveley
Innovating high school genomic education with hands-on and classroom teaching methods., Ashley Greaves
The role of androgen receptor in meiotic progress of male germ cells., Nadia V. Harerimana
Characterization of Crichton mutation leading to age-dependent, behavioral phenotypes., Molly Herman
Establishing a role for the kinesin-8 superfamily member Kif18a during cell migration., Ashley Hudson
Elucidating retinal transcripts correlated with changes in the aging brain of an Alzheimer's mouse model., Julia Huesa
Determining the relationship between spermatogonial stem cells and blood vessels in mouse testis., Yuzhao Hu
Varying non-synonymous/synonymous rate ratios (dN/dS) in TCGA data points to prevalence of Darwinian tumor evolution, Alexander Iyabor Jr.
Tandem duplications affect gene integrity/expression in triple negative breast cancer., Tyler Jackson
Lethality in hspn mutant mice., Se Rin (Julie) Kim
The relationship between the adaptive immune system and aging., Samuel Elliot Krause
Discovering the role of pathogenic BRCA1 mutations in tandem duplicator phenotype development., Conner Lajoie
Manipulating beta cell regulatory circuitry using CRISPR/Cas9 epigenome editing., Rujia Lian
Heightened human red blood cell survival in genetically and chemically engineered next generation NSG mice., Cedric Lozano
Modulation of the adaptive immune system by cardiac fibroblasts., Maddie Mara
Analysis of the expression pattern of the Egr2-cre driver in the mouse brain during postnatal development., Kiersten Marr
Investigating the effects of sodium channel dysfunction on chemotherapy induced peripheral neuropathy., Carla Martinez
Building regression models for predicting age from human blood epigenomes profiled with the ATAC-seq technology., Gokul Parakulam
Polygenic and Mendelian mechanisms of inherited anemia., Tejal Patwardhan
An exploratory analysis of international mouse phenotyping consortium (IMPC) data., Stephen Price
ADAD2: a new player in RNA granule biology., Cassandra Rios
Survey on variation in epigenetic histone modification across nine inbred mouse strains., Arya Royal
Investigation of the effect of structural variants on RNA secondary structure., Amber Salome
The experimental validation of structural variation candidates produced by the FusorSV algorithm., John E. Sargent
Positional cloning of the genetic mutation and histological analysis of femoral nerve axonal degeneration in the NM4803 mouse mutant., Allen Schroeder
Data integration & analysis of the epigenetics of drug and alcohol dependence: an application of GeneWeaver., Nkima J Stephenson
Alternative splicing: approaching transcriptome complexity in human immune cell subsets., Christina Welch
IGF-1 and healthy aging., Madeline Williams
Predicting differential regulation of cell cycle genes in aging hematopoietic progenitor cells., Zollie Yavarow
Submissions from 2015
Cell cycle and survival status of erythroid precursors in the Nan mouse model., Omorose Aighewi
DSCAM and DSCAML1 molecular mechanisms of self avoidance., Julia Bassell
The effect of repurposed drugs: sertraline, fluoxetine, and cannibidiol on spontaneous seizure activity in fitful mice., Jacqueline Bridges
Elucidating the function of Yap in normal and cancer stem cells in the brain., Xingyao Chen
Examining the antitumor activity of a monoclonal antibody via complement-dependent cytotoxicity in novel NSG mouse model., Julia Clemens
Neuroprotective drug treatment in DBA/2J glaucoma., Kelly Cochran
The influence of the NOD/ShiLtJ genetic background on a mouse model of Alzheimer's disease., Calvin Coffey
Acetyl-L-Carnitine: a potential therapy for alleviation of the neurophysiological effects of Charcot-Marie-Tooth disease type 2D., Meagan Currie
The biological significance of hub genes found by weighted correlation network analysis., Reanna Dona
Exploring the genetic mechanisms of exfoliation syndrome and glaucoma., Annie Gagnon
The role of Hbs1l in the developing brain., Thomas Gallup
Neuroinflammation and early cognitive decline induced by short-term exposure to western diet in C57BL/6J mice., Weronika Grabowska
The role of 3' untranslated region (3'UTR) in Celf4 regulation of target mRNA., Daniel S. Hawkins
A pipeline to discover new genes involved in Cochlear hair cell differentiation., Lawrence Jacobs
Assessment of hepatic insulin signaling in a murine model for Alstrom Syndrome., Ayla Kanber
The challenges of mosaicism., Emily Keator
Identification of gene expression in the murine tissue surrounding tumors in patient derived xenograft mouse models., Adam Lavertu
Gene activation through enhancer epigenetic modifications using Casilio, a three-hybrid CRISPRzyme system., Phoebe Lee
Targeted therapeutic treatment of MLL-rearranged AML based on the cell of origin., Matthew A. Loberg
The effectiveness of CHK2 inhibitors for oocyte survival after induced DNA damage., Julia Loose
Identifying genome signatures of drug response in patient derived xenografts (PDX): a machine learning approach., Jacob Luber
Superimposing gene expression data onto gene interaction data to evaluate molecular networks during mouse development., Dylan Maghini
A novel Cux1 CRISPR-Cas9 knockout system to study mesangial matrix expansion in mouse kidney cells., Demetri Maxim
Examining the role of inhibitory GABAergic neurons in the pathophysiology of Rett Syndrome., Kevin Newhall
Orthologs and isoforms and conservation of function., Daniela Perry
The role of pancreatic Irx3 in the gut-brain axis., Jaye Sudweeks
Discovery of enriched variants for Alzheimer's disease., Carl Vitzthum
Taking a BAT at obesity with Ucp1., Judy A. Yau
Submissions from 2014
Investigation into the immunogenicity of green fluorescence protein as a tool to eliminate populations of cells in vivo., Isaac Aderinto
The effects of histone deacetylase 6 inhibition on a mouse model of Charcot-Marie-Tooth disease type 2D., Opemipo Akerele
The role of the interleukin-2 receptor {gamma} gene in the development and progression of DBA/2J glaucoma., Ricky Anjorin
Development of a human macrophage migration inhibitory factor transgenic NSG mouse model to enhance engraftment of primary human chronic lymphocytic leukemia., Olive Baranowski
The role of telomere length in meiotic DNA recombination., Isabella Beroutsos
Exploring the efficiency of the codon optimized flippase in vivo., George Chen
Mastering the biological clock., Natalie Correa
Does ribosome stalling in the nmf205 mutant brain disrupt proteostasis?, Audrey Crane
PCR-based validation of structural variations predicted by whole genome sequencing using triple negative breast cancer cell lines., Jackson Dalman
Discovering the distinct genetic components contributing to anaplastic thyroid cancer using bioinformatics tools., Erika M. Estrada
Validity of heterozygous Dscam mice model (Mus musculus) for human ASD., Allyson Fulton
LIGER: a platform for Pacbio transcriptome analysis., Nicholas K.S. Grewal
Strain differences in Pavlovian sign-tracking and goal-tracking surveyed among Collaborative Cross founder strains., Lingfeng Hou
An improved approach to model epistatic interactions among multiple genetic variants., Tian-Shun Allan Jiang